Analysis Description
--------------------
aBSREL (Adaptive branch-site random effects likelihood) uses an adaptive
random effects branch-site model framework to test whether each branch
has evolved under positive selection, using a procedure which infers an
optimal number of rate categories per branch.

- __Requirements__: in-frame codon alignment and a phylogenetic tree

- __Citation__: Less Is More: An Adaptive Branch-Site Random Effects Model for Efficient
Detection of Episodic Diversifying Selection (2015). Mol Biol Evol 32
(5): 1342-1353. v2.2 adds support for multiple-hit models. v2.3 adds
support for SRV

- __Written by__: Sergei L Kosakovsky Pond, Ben Murrell, Steven Weaver and Temple iGEM /
UCSD viral evolution group

- __Contact Information__: spond@temple.edu

- __Analysis Version__: 2.3


>code –> Universal
/home/datamonkey/datamonkey-js-server/production/app/absrel/output/63472b6835d8215fcb2fd88c.tre
/home/datamonkey/datamonkey-js-server/production/app/absrel/output/63472b6835d8215fcb2fd88c.tre

>Loaded a multiple sequence alignment with **18** sequences, **84** codons, and **3** partitions from `/home/datamonkey/datamonkey-js-server/production/app/absrel/output/63472b6835d8215fcb2fd88c`

>branches –> FG

>multiple-hits –> None

>srv –> No
Error:

Master node received an error:aBSREL only works on a single partition dataset in call to assert(utility.Array1D(absrel.partitions_and_trees)==1, error_msg);

Function call stack
1 :  assert(utility.Array1D(absrel.partitions_and_trees)==1, error_msg);
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2 :  ExecuteCommands("assert (`statement`, error_msg)", /home/datamonkey/datamonkey-js-server/production/app/absrel/../../.hyphy/res/TemplateBatchFiles/libv3/);
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3 :  io.CheckAssertion("utility.Array1D (absrel.partitions_and_trees) == 1","aBSREL only works on a single partition dataset");
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